DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and Msx3

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_034966.1 Gene:Msx3 / 17703 MGIID:106587 Length:204 Species:Mus musculus


Alignment Length:136 Identity:53/136 - (38%)
Similarity:68/136 - (50%) Gaps:19/136 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 VEKRSQEDRMEVP-KKSPE---EQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSN 247
            ||...:.:|  || .:|.|   |:|.||||.....|..|   .|.........|.||.      .
Mouse    30 VESLLEAER--VPGSESGELGVERPLGASKPGAWPPPVA---HSCPPRAPSPPPCTLR------K 83

  Fly   248 PKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR---- 308
            .|..||.||.||..|:..||::|..::|||.|:|.|.:..|.|:..||..||||||||.||    
Mouse    84 HKTNRKPRTPFTTAQLLALERKFHQKQYLSIAERAEFSSSLSLTETQVKIWFQNRRAKAKRLQEA 148

  Fly   309 DMEELK 314
            ::|:||
Mouse   149 ELEKLK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 45/113 (40%)
Homeodomain 252..308 CDD:459649 28/55 (51%)
Msx3NP_034966.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..89 17/58 (29%)
Homeodomain 88..144 CDD:459649 28/55 (51%)

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