DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and ceh-43

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001338832.1 Gene:ceh-43 / 175581 WormBaseID:WBGene00000463 Length:282 Species:Caenorhabditis elegans


Alignment Length:126 Identity:42/126 - (33%)
Similarity:59/126 - (46%) Gaps:30/126 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 GDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPA 279
            |.:|.:|..:.:|....|..: |..|:     ..||.||.||.:.:.|:..|:|:|...:||:..
 Worm    72 GSSPEEAFPEHTTTKIVEGCE-AKYNV-----KGKKMRKPRTIYNSSQLQMLQKKFQKTQYLALP 130

  Fly   280 DRDEIAGGLGLS---NAQVIT------WFQNRRAKLKR---------------DMEELKKD 316
            ||..:|..||||   .||.||      ||||||:|.|:               |.||.|.:
 Worm   131 DRAALAHELGLSQTQRAQPITEFQVKIWFQNRRSKQKKQKGGSSDHASDEEDDDTEESKPE 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 42/126 (33%)
Homeodomain 252..308 CDD:459649 28/64 (44%)
ceh-43NP_001338832.1 Homeodomain 103..168 CDD:459649 28/64 (44%)

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