DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and ceh-12

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_491693.1 Gene:ceh-12 / 172255 WormBaseID:WBGene00000436 Length:180 Species:Caenorhabditis elegans


Alignment Length:160 Identity:46/160 - (28%)
Similarity:74/160 - (46%) Gaps:20/160 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 SSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGA---SKSSGDTPLDALF 223
            ||:...:...|:.|    .|:|.........|:.|::..|:.:...:.:   |.||..:|...:.
 Worm    15 SSQNEDQKLESHPS----PPSQIPNYSTSCSEELMKMAAKAAQFAAQASLENSFSSSTSPTSTVT 75

  Fly   224 QLSTKN----------FDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSP 278
            .||...          :|......::|.:....   |.|:.||||:::|:.:|||:|...:|||.
 Worm    76 PLSAYTSLVQPVLPLIYDHLALTYSVNAWQAWG---KMRRPRTAFSSEQLVQLEKQFSDNRYLSR 137

  Fly   279 ADRDEIAGGLGLSNAQVITWFQNRRAKLKR 308
            ..|.::|..|.||..|:..||||||.|.||
 Worm   138 PRRYQLAQQLSLSETQIKIWFQNRRMKNKR 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 37/116 (32%)
Homeodomain 252..308 CDD:459649 26/55 (47%)
ceh-12NP_491693.1 Homeodomain 111..167 CDD:459649 26/55 (47%)

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