DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lbl and Lbx2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_034822.1 Gene:Lbx2 / 16815 MGIID:1342288 Length:195 Species:Mus musculus


Alignment Length:157 Identity:69/157 - (43%)
Similarity:94/157 - (59%) Gaps:29/157 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 EVPK--KSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNP----------K 249
            |.|.  :.||..|..||      ||.||.:|::|.|......||......|:.|          :
Mouse    24 EAPSAPQLPEAGPDPAS------PLCALEELASKTFLGHSPRATPQPSEGRAAPEAPPGPGAGVR 82

  Fly   250 KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELK 314
            ::||||||||.||:.|||:||::||||:|::||.:|..|||:||||:|||||||||||||:||::
Mouse    83 RRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEEMR 147

  Fly   315 KDVQ----------C-EKIPDQSADPN 330
            .||.          | ..:||.::.|:
Mouse   148 ADVASLCGLSPGVLCYPALPDSTSSPD 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 65/146 (45%)
Homeodomain 252..308 CDD:459649 40/55 (73%)
Lbx2NP_034822.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..89 21/70 (30%)
Homeodomain 85..141 CDD:459649 40/55 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 164..195 3/11 (27%)

Return to query results.
Submit another query.