DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and Hoxb1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_006532343.1 Gene:Hoxb1 / 15407 MGIID:96182 Length:330 Species:Mus musculus


Alignment Length:58 Identity:32/58 - (55%)
Similarity:37/58 - (63%) Gaps:0/58 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 RTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEE 312
            ||.||.:|:.||||.|.:.||||.|.|.|||..|.|:..||..||||||.|.|:...|
Mouse   236 RTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRERE 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 32/58 (55%)
Homeodomain 252..308 CDD:459649 30/52 (58%)
Hoxb1XP_006532343.1 Homeodomain 236..289 CDD:459649 30/52 (58%)

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