DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and gbx1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_777286.1 Gene:gbx1 / 142985 ZFINID:ZDB-GENE-020117-2 Length:316 Species:Danio rerio


Alignment Length:401 Identity:96/401 - (23%)
Similarity:134/401 - (33%) Gaps:154/401 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PQRTPSPANSDVSVGSPSPPPLRSL-----NMKRLRLLRSPISLEHDRQKSSPVRVKSFSIADIL 61
            |..|.:..:.|..:|:|.|.|...|     .....|.|..|.:|.|.                  
Zfish     4 PSGTGTAFSIDSLIGTPQPRPGHLLYTGYPMFMPYRPLMIPQALSHS------------------ 50

  Fly    62 GRGHEEDRVEKKPERIAIPNALPGVPAPLALINERL--------------QIPLVPNCP----PP 108
                            ::|:.:|.: ||||....||              .:.|....|    ||
Zfish    51 ----------------SLPSGIPPL-APLASFAGRLTNTFCAGLGQGMPSMVALTTTLPSFSDPP 98

  Fly   109 AALHTFLSPALLHSYEQRLAWD---YQRQLQEHFQAQAQLLRQMTLNPAIIASE----------- 159
               .:|..|..:..  .||..|   ..||...|.:.:...|...|.....:|.|           
Zfish    99 ---DSFYPPQEMPG--PRLGADGTGMNRQESPHDELKGSELLNFTETFQAVAGETKLYSSDDEKL 158

  Fly   160 ------------DGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASK 212
                        :.||..|:..|.|:|:| |.|.:|..|::..||           :..|.|.|.
Zfish   159 DLKAAEAACSDREDSSADSENESFSDGNT-CASASQKGKLKGGSQ-----------DALPPGGSA 211

  Fly   213 SSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLS 277
            .                                    |.|:.|||||::|:.||||.|..:||||
Zfish   212 G------------------------------------KSRRRRTAFTSEQLLELEKEFHCKKYLS 240

  Fly   278 PADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRS---------H 333
            ..:|.:||..|.||..||..||||||||.||        ::...:.::|.:|.|:         |
Zfish   241 LTERSQIAHALKLSEVQVKIWFQNRRAKWKR--------IKAGNVNNRSGEPVRNPKIVVPIPVH 297

  Fly   334 HNHPHYHQQHQ 344
            .|......|||
Zfish   298 VNRFAVRSQHQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 40/125 (32%)
Homeodomain 252..308 CDD:459649 32/55 (58%)
gbx1NP_777286.1 Homeodomain 215..271 CDD:459649 32/55 (58%)

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