DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and Dlx6

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_034187.1 Gene:Dlx6 / 13396 MGIID:101927 Length:297 Species:Mus musculus


Alignment Length:242 Identity:59/242 - (24%)
Similarity:94/242 - (38%) Gaps:36/242 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 ERLQIPLVPNCPPPAALHT-FLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIAS 158
            ::.|.|..|..|||...|: ..|||:..:               |:....       |:.|..|:
Mouse    43 QQQQQPPPPPPPPPPQPHSQQTSPAMAGA---------------HYPLHC-------LHSAAAAA 85

  Fly   159 EDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALF 223
            ....|.........:||....|...:......:....|...:.||..|....|.::..|..|   
Mouse    86 AAAGSHHHHHQHHHHGSPYASSGGNSYNHRSLAAYPYMSHSQHSPYLQSYHNSSAAAQTRGD--- 147

  Fly   224 QLSTKNFDEEQDPATL---NIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIA 285
                   |.:|...|:   .........||.||.||.:::.|:..|..||...:||:..:|.|:|
Mouse   148 -------DTDQQKTTVIENGEIRFNGKGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELA 205

  Fly   286 GGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRS 332
            ..|||:..||..||||:|:|.|:.:::.....:.:.:|..:|...||
Mouse   206 ASLGLTQTQVKIWFQNKRSKFKKLLKQGSNPHESDPLPGSAALSPRS 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 36/128 (28%)
Homeodomain 252..308 CDD:459649 24/55 (44%)
Dlx6NP_034187.1 COG5576 123..279 CDD:227863 41/140 (29%)
Homeodomain 172..228 CDD:459649 24/55 (44%)

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