DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and ATHB54

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001322131.1 Gene:ATHB54 / 10723019 AraportID:AT1G27045 Length:252 Species:Arabidopsis thaliana


Alignment Length:169 Identity:47/169 - (27%)
Similarity:67/169 - (39%) Gaps:30/169 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 ALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIA 285
            ::....|...|||.   ....:..|...||::     .|..|:..||:.|..:|.|.|..:..:|
plant    43 SMINTETATMDEED---VCESYMMREITKKRK-----LTPIQLRLLEESFEEEKRLEPDRKLWLA 99

  Fly   286 GGLGLSNAQVITWFQNRRAK------------LKRDMEELKKDVQCEKIPDQSADPNRSHHNH-- 336
            ..|||..:||..|||||||:            ||....:||.|.....:.:|:........|.  
plant   100 EKLGLQPSQVAVWFQNRRARYKTKQLEHDCDSLKASYAKLKTDWDILFVQNQTLKSKVQFLNRLT 164

  Fly   337 PHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKDKEEL 375
            .||.|        :|:.:..|..|.....|||.|.:|.|
plant   165 SHYFQ--------ESVQNFDDTFKQVDLLKEKLKMQENL 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 34/122 (28%)
Homeodomain 252..308 CDD:459649 22/67 (33%)
ATHB54NP_001322131.1 HOX 68..121 CDD:197696 23/57 (40%)
HALZ 123..161 CDD:460477 6/37 (16%)

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