DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and dbx1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_002940015.1 Gene:dbx1 / 100495433 XenbaseID:XB-GENE-480177 Length:328 Species:Xenopus tropicalis


Alignment Length:343 Identity:83/343 - (24%)
Similarity:120/343 - (34%) Gaps:100/343 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 PPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQ-LLRQMTLNPAIIASEDGSSERSQRSS 170
            |||.....|.|....:..|.:    |..|..|.....: |:|        |:...|...|:....
 Frog     9 PPAVYPNLLRPTPTLTLPQSI----QTALSSHTSFLIEDLIR--------ISRPAGFLPRAVPPP 61

  Fly   171 SSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPL----DALFQLSTKN-- 229
            |.:..|. .|||...           |||..:..|.|...|.::..|.|    :|:...|.:.  
 Frog    62 SMSPPTS-DSPTSLS-----------EVPDLARREAPTSISSNNSSTFLKFGVNAILSASPRTET 114

  Fly   230 ------------------FD--------EEQDPATLNI----------FATRSNPKKKRKSRTAF 258
                              |:        ....||:.::          .|.|..|::....|..|
 Frog   115 CPALPPSVAPPKAFAFPYFEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRGMLRRAVF 179

  Fly   259 TNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDME-ELKKDVQCEK- 321
            ::.|...|||.|..|||:|..||.::||.|||.::||..||||||.|.:...| ||.....|.: 
 Frog   180 SDVQRKALEKMFQKQKYISKPDRKKLAGKLGLKDSQVKIWFQNRRMKWRNSKERELLSSGGCREQ 244

  Fly   322 --------IPDQS-----------ADP--NRSHHNHPHYHQQHQHYAHMQ--------SIGSDRD 357
                    .||.|           .:|  |...|:.|:...:|......|        ||.|...
 Frog   245 TLPTKFNPHPDLSDVGKKSSGEGEEEPMCNSPAHSSPYQCPEHSLRLDAQLPPSPFNSSIASKPS 309

  Fly   358 MDKDRCREKEKDKDKEEL 375
            ...|  .|:|:.:.:||:
 Frog   310 DFSD--SEEEEGEQEEEI 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 48/190 (25%)
Homeodomain 252..308 CDD:459649 27/55 (49%)
dbx1XP_002940015.1 Homeodomain 175..229 CDD:459649 27/53 (51%)

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