DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hoxb8

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_002938067.1 Gene:hoxb8 / 100493882 XenbaseID:XB-GENE-990961 Length:243 Species:Xenopus tropicalis


Alignment Length:172 Identity:48/172 - (27%)
Similarity:68/172 - (39%) Gaps:54/172 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 SSGDTPLDALFQ--LSTKNFDE-----EQDPATLNIFATRSNPKK---KRKSRTAFTNQQIFELE 267
            ||.||.|....:  |::....|     ||.|:...:|.. ..|:.   :|:.|..::..|..|||
 Frog    98 SSQDTELVQYSECKLASAGLGEEAESSEQSPSPTQLFPW-MRPQAAAGRRRGRQTYSRYQTLELE 161

  Fly   268 KRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRS 332
            |.||:..||:...|.|::..|||:..||..||||||.|.|:   |..||    |.|         
 Frog   162 KEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK---ENNKD----KFP--------- 210

  Fly   333 HHNHPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKDKEE 374
                                       ..:|.::|.:|.|.|
 Frog   211 ---------------------------SSKCEQEELEKQKME 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 43/128 (34%)
Homeodomain 252..308 CDD:459649 25/55 (45%)
hoxb8XP_002938067.1 Homeodomain 146..202 CDD:459649 25/55 (45%)

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