DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and dbx2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_002932867.1 Gene:dbx2 / 100489622 XenbaseID:XB-GENE-481734 Length:251 Species:Xenopus tropicalis


Alignment Length:188 Identity:54/188 - (28%)
Similarity:72/188 - (38%) Gaps:42/188 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 TECCSPTQAEKVEKRSQEDR---MEVPKKSPEEQPKGASKSSGD---TPLDALFQLSTKNFDEE- 233
            |:|  ||:.:.....|...|   .::.:.|...||......:||   |.......|.:..|... 
 Frog    65 TQC--PTKEQFSSLGSTYPRTWTFQLLRTSDRRQPFYPHPFTGDVYETAFSKYCYLQSAPFYSAC 127

  Fly   234 -----QDPATLNIFATR----------SNPKKKR--KSRTAFTNQQIFELEKRFLYQKYLSPADR 281
                 |.||:...|...          ::.|.:|  ..|..|:.:|...|||.|..|||:|..||
 Frog   128 CGGSCQHPASPTAFPRNEMLPPLCGQDASSKTRRVILRRAVFSEEQRKSLEKMFQKQKYISKVDR 192

  Fly   282 DEIAGGLGLSNAQVITWFQNRRAK--------------LKRDMEE--LKKDVQCEKIP 323
            ..:|..|.|..:||..||||||.|              ||.|..|  |.:.|||...|
 Frog   193 KNLAVNLALKESQVKIWFQNRRMKWRNSKEKSVLSNKFLKEDSAEQKLSRTVQCIHTP 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 47/155 (30%)
Homeodomain 252..308 CDD:459649 27/71 (38%)
dbx2XP_002932867.1 Homeodomain 165..219 CDD:459649 25/53 (47%)

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