DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hlx

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_004914850.1 Gene:hlx / 100488508 XenbaseID:XB-GENE-483226 Length:397 Species:Xenopus tropicalis


Alignment Length:328 Identity:90/328 - (27%)
Similarity:134/328 - (40%) Gaps:78/328 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 SFSIADILGRGHEEDRVEKKPERIAIPNALPGV-------PA----------PLALINERLQIPL 101
            ||.|||||..|..    |..|...|:..|..||       ||          |.:..:.||. ||
 Frog    43 SFCIADILHGGDP----ESPPGSSALTAASVGVIHPAQYQPAGSPFRPTPVTPESSFHHRLS-PL 102

  Fly   102 VP-----------NCPPPAALHTFLSPA-----LLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMT 150
            .|           |....|.:|....||     |....::.|:.::..:::|     ...||.:|
 Frog   103 PPYQPHRAVSLCTNNSSRARMHKSTQPAPCSKDLKFGIDRILSAEFDPKVKE-----GNTLRDLT 162

  Fly   151 LNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSG 215
               ::|::...|....|...|:.|  ...:|.: ...|..|...::...::|..:|.:......|
 Frog   163 ---SLISAGQQSGLPGQHMQSTAG--HFFAPLE-PLGEASSLLGQLNGSQRSSVQQFQDTFPGDG 221

  Fly   216 DTPLD--ALFQLSTKNFDEEQDPATLNIFATRSNPKKKRK-SRTAFTNQQIFELEKRFLYQKYLS 277
            ...|.  ..:.:.||    :..|.|.         |:||. ||..|:|.|...|||||..|||::
 Frog   222 SRKLYMWGPYAVLTK----DTMPQTY---------KRKRSWSRAVFSNLQRKGLEKRFEVQKYVT 273

  Fly   278 PADRDEIAGGLGLSNAQVITWFQNRRAKLKRDME-ELKKDVQCEKIP------------DQSADP 329
            ..||.::|..|||::|||..||||||.|.:...| :.:||.:.|:..            |:|:.|
 Frog   274 KPDRKQLAAMLGLTDAQVKVWFQNRRMKWRHSKEAQAQKDKEKEEAEKPEAPGSGEVQMDRSSSP 338

  Fly   330 NRS 332
            .||
 Frog   339 YRS 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 46/141 (33%)
Homeodomain 252..308 CDD:459649 30/56 (54%)
hlxXP_004914850.1 Homeodomain 244..304 CDD:459649 32/59 (54%)

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