DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hmx2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:231 Identity:57/231 - (24%)
Similarity:97/231 - (41%) Gaps:41/231 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PNCPPPAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQ 167
            |....||.|.:|...::|           |....:..:..|::..:..::....:|::...:.|.
 Frog     7 PTKSAPATLSSFTIQSIL-----------QGTTSDRGRTAARVYTREAISCPSTSSDEDEQDESW 60

  Fly   168 RSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDE 232
            |....|    |..|...:              .|.....|.||.:....|.:.:   .|.:::.|
 Frog    61 RGHGCN----CPDPGDKD--------------SKGQAPHPCGAHRCPNRTQMPS---PSQQDYTE 104

  Fly   233 EQD---PATLNIFATRSNPK---KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLS 291
            |:|   |.:|.........|   .|:|:||.|:..|:::||..|..::|||.::|..:|..|.|:
 Frog   105 EKDSHYPQSLGDRHKDGGDKMGNSKKKTRTVFSRSQVYQLESTFDMKRYLSSSERACLASSLQLT 169

  Fly   292 NAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSA 327
            ..||.|||||||.|.||   :|..:::...:...||
 Frog   170 ETQVKTWFQNRRNKWKR---QLSAELEAANMAHASA 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 42/128 (33%)
Homeodomain 252..308 CDD:459649 25/55 (45%)
hmx2XP_002937849.1 Homeodomain 130..186 CDD:459649 25/55 (45%)

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