DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and nkx1-2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_002937845.1 Gene:nkx1-2 / 100486193 XenbaseID:XB-GENE-854960 Length:246 Species:Xenopus tropicalis


Alignment Length:226 Identity:61/226 - (26%)
Similarity:89/226 - (39%) Gaps:60/226 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 TECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDT----PLDAL-----FQLSTKNFD 231
            |:..:..:.::|::.:||..|               |..|||    |.|::     .:..|...:
 Frog    27 TDILNHAKVQQVKEGTQEPGM---------------KEKGDTGLTLPSDSMVSGPEIKAETSPGE 76

  Fly   232 EEQDPATLNIFATRSNPK----KKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSN 292
            .|:.|.......|::.|.    |.|::|||||.:|:..||.||...:|||..:|..:|..|.|:.
 Frog    77 PEELPEKEENQETQNVPSVTNCKPRRARTAFTYEQLVALESRFRSSRYLSVCERLSLALTLHLTE 141

  Fly   293 AQVITWFQNRRAKLKR-----DMEELKKDVQ-CEKIPDQSAD---PNRSHHNH-PHYHQQHQHYA 347
            .||..||||||.|.|:     .:|.....:| |..||.....   ||.....| ||......|.:
 Frog   142 TQVKIWFQNRRTKWKKQQPIGSLEGRGCSIQNCPTIPGPRFTPPLPNYPCATHIPHIGAGANHLS 206

  Fly   348 ----------------------HMQSIGSDR 356
                                  :.|.|||.|
 Frog   207 PFPGIFFSPPSTSFGLSPTGATYPQFIGSSR 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 47/147 (32%)
Homeodomain 252..308 CDD:459649 27/55 (49%)
nkx1-2XP_002937845.1 Homeodomain 101..157 CDD:459649 27/55 (49%)

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