DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hoxb5

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001094494.1 Gene:hoxb5 / 100113366 XenbaseID:XB-GENE-1005991 Length:258 Species:Xenopus tropicalis


Alignment Length:159 Identity:52/159 - (32%)
Similarity:72/159 - (45%) Gaps:22/159 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 LNPAIIASEDGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSG 215
            |:|...|:..|||.:......::.|:|         .|:.|.......|:...|....||:.:.|
 Frog   105 LSPTDPATSAGSSAQFTEVEETSASSE---------TEESSTPRSSAPPRALQENSSPGAAGTDG 160

  Fly   216 DTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPAD 280
            ..|  .:|....|          |:|....:.|..|| :|||:|..|..||||.|.:.:||:...
 Frog   161 QNP--QIFPWMRK----------LHINHDMTGPDGKR-ARTAYTRYQTLELEKEFHFNRYLTRRR 212

  Fly   281 RDEIAGGLGLSNAQVITWFQNRRAKLKRD 309
            |.|||..|.||..|:..||||||.|.|:|
 Frog   213 RIEIAHALCLSERQIKIWFQNRRMKWKKD 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 40/104 (38%)
Homeodomain 252..308 CDD:459649 28/55 (51%)
hoxb5NP_001094494.1 Homeodomain 184..240 CDD:459649 29/56 (52%)

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