DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and ventx1

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:NP_001107707.1 Gene:ventx1 / 100101668 XenbaseID:XB-GENE-920501 Length:277 Species:Xenopus tropicalis


Alignment Length:336 Identity:83/336 - (24%)
Similarity:113/336 - (33%) Gaps:119/336 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 KSFSIADILGRGHEE-----DRVEKKPERIAIPNALPGVPAPLALINERLQIPLVPNCPPPAALH 112
            :.|||..||.|..||     |.|..:|.       :|..|.|||......:||...:        
 Frog     4 QGFSIDLILARNREEAPDGKDSVSSRPH-------IPCAPQPLAPTKYAKEIPRRKD-------- 53

  Fly   113 TFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASEDGSSERSQRSSSSNGSTE 177
                     ..||..|..:|..|.:|    ...|...:.:.|.:....|||:....:.|.:.||:
 Frog    54 ---------GQEQGDATSFQSSLGKH----GDKLHYSSPSSAALHRNWGSSDEFSSAGSEDDSTD 105

  Fly   178 -CCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNI 241
             ..||.      :.|||...:...|||:..                                   
 Frog   106 GFPSPV------RNSQETETDCRGKSPKSD----------------------------------- 129

  Fly   242 FATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKL 306
                    .:|:.||||| .||..||:.|..|:||..::|.::|..|.||..||.|||||||.||
 Frog   130 --------LQRRLRTAFT-PQISRLEQAFNKQRYLGASERKKLATSLRLSEIQVKTWFQNRRMKL 185

  Fly   307 KRDMEELKKDVQCEKIPDQSADPNRSHH------------------NHPHYHQQHQ--------- 344
            ||.::    |.|...:|.....|....:                  .||....||.         
 Frog   186 KRQIQ----DQQHSMVPPPVCYPQTFSYYPGGLPVPLNSGSFFQPPAHPFQTPQHSYIPDPRFIP 246

  Fly   345 ----HYAHMQS 351
                |:..|.|
 Frog   247 QTLPHHVRMSS 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 36/125 (29%)
Homeodomain 252..308 CDD:459649 30/55 (55%)
ventx1NP_001107707.1 Homeodomain 132..187 CDD:459649 30/55 (55%)

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