DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and hoxb2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_012808332.1 Gene:hoxb2 / 100038155 XenbaseID:XB-GENE-478525 Length:340 Species:Xenopus tropicalis


Alignment Length:308 Identity:84/308 - (27%)
Similarity:112/308 - (36%) Gaps:102/308 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 LALINERLQIPLVPNCPP--PAALHTFLSPALLHS------YEQRL-----AWDYQRQLQEHFQA 141
            :..||.:   |.:..|..  ||.|.||.:.::..|      :||.:     ..|.|.:.:...:|
 Frog     9 IGFINSQ---PSLAECLTSFPAVLETFQTSSIKDSTLIPPPFEQTIPSLNPGSDSQIRPKSQKRA 70

  Fly   142 QAQLLRQMTLNPAIIASE-DGSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEE 205
            :..||:|..:.|..:|:| ....|:.....||.||.:...|..             |....||.|
 Frog    71 ENGLLQQPQVQPGHLATEFPWMKEKKSAKKSSQGSPQALIPPP-------------ESAGGSPAE 122

  Fly   206 QPKGASKSSGDTPLDALFQLSTKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRF 270
             |.|...:.|.:                                  |:.|||:||.|:.||||.|
 Frog   123 -PPGLHDAGGGS----------------------------------RRLRTAYTNTQLLELEKEF 152

  Fly   271 LYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDVQCEKIPDQSADPNRSHHN 335
            .:.|||....|.|||..|.|:..||..||||||.|.||..:.  ||         |.|...|:.|
 Frog   153 HFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQH--KD---------SQDGEHSYSN 206

  Fly   336 ------------HPHYHQQHQHYAHMQSIGSDRDMDKDRCREKEKDKD 371
                        .|.|||           |.|   ..|..||:|..||
 Frog   207 PEDGEPLDDGDDSPVYHQ-----------GLD---SNDSLREQEIRKD 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 39/125 (31%)
Homeodomain 252..308 CDD:459649 30/55 (55%)
hoxb2XP_012808332.1 Homeodomain 134..190 CDD:459649 30/55 (55%)

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