Protein Alignment lbl and cdx1b

DIOPT Version :10

• Sequence 1: NP_001262805.1
• Gene: lbl / 42541
• FlyBaseID: FBgn0008651
• Length: 410
• Species: Drosophila melanogaster
• Sequence 2: NP_001092232.1
• Gene: cdx1b / 100004956
• ZFINID: ZDB-GENE-070615-29
• Length: 255
• Species: Danio rerio
• Alignment Length: 168
• Identity: 49/168 - (29%)
• Similarity: 63/168 - (37%)
• Gaps: 43/168 - (25%)

  Fly   199 PKKSPEEQPKG-----ASKSSGDTPLDALFQLSTKNFDEEQDPATLNIF-----------ATRSN 247
            |....|..|.|     :|.|:|.      ...|...|...|.|..|...           |.|.|
Zfish    67 PPPREEWTPYGPGSGVSSSSTGQ------LGFSPPEFSSVQTPGLLQSSINSSVGQLSPNAQRRN 125

  Fly   248 P-----------------KKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQV 295
            |                 :.|.|.|..:|:.|..||||.|.|.:|::...:.|:|..|.||..||
Zfish   126 PYDWMRRSVPPASSGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAELATALSLSERQV 190

  Fly   296 ITWFQNRRAK----LKRDMEELKKDVQCEKIPDQSADP 329
            ..||||||||    .|:.|::.:........|..||.|
Zfish   191 KIWFQNRRAKERKINKKKMQQPQPASTTTPTPPGSALP 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lbl	NP_001262805.1	COG5576	206..332	CDD:227863	47/161 (29%)
		Homeodomain	252..308	CDD:459649	26/59 (44%)
cdx1b	NP_001092232.1	Caudal_act	13..140	CDD:461413	16/78 (21%)
		Homeodomain	148..203	CDD:459649	26/54 (48%)