DRSC/TRiP Functional Genomics Resources

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Protein Alignment lbl and barx2

DIOPT Version :10

Sequence 1:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster
Sequence 2:XP_001342044.1 Gene:barx2 / 100002200 ZFINID:ZDB-GENE-081120-4 Length:268 Species:Danio rerio


Alignment Length:278 Identity:73/278 - (26%)
Similarity:98/278 - (35%) Gaps:109/278 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 RSPISLEHDRQKSSPVRVKSFSIADILGRGHEEDRVEKKPERIAIPNALPGVPAPLALINERLQI 99
            ::.:.|....|..:..|.|:|.|.:||.: ...|..||                          :
Zfish     4 QAELRLASSAQLKAARRYKTFMIDEILSK-ETCDYFEK--------------------------L 41

  Fly   100 PLVPNCPP----PAALHTFLSPALLHSYEQRLAWDYQRQLQEHFQAQAQLLRQMTLNPAIIASED 160
            .|...||.    |..||:......|.||                    .||..:|          
Zfish    42 SLYSVCPSLIVRPKPLHSCTGSVPLRSY--------------------PLLSVIT---------- 76

  Fly   161 GSSERSQRSSSSNGSTECCSPTQAEKVEKRSQEDRMEVPKKSPEEQPKGASKSSGDTPLDALFQL 225
                 .|.|||       .||                :.:.||...|      |.:|||    .:
Zfish    77 -----HQASSS-------VSP----------------LSQSSPHLPP------SSETPL----SI 103

  Fly   226 STKNFDEEQDPATLNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGL 290
            |:::..|...|..          ||.|:|||.||..|:..|||:|..|||||..||.::|..|||
Zfish   104 SSESDTEHCTPRL----------KKPRRSRTIFTELQLLGLEKKFQKQKYLSTPDRLDLAQSLGL 158

  Fly   291 SNAQVITWFQNRRAKLKR 308
            :..||.||:||||.|.|:
Zfish   159 TQLQVKTWYQNRRMKWKK 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lblNP_001262805.1 COG5576 206..332 CDD:227863 42/103 (41%)
Homeodomain 252..308 CDD:459649 31/55 (56%)
barx2XP_001342044.1 Homeodomain 120..176 CDD:459649 31/55 (56%)

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