DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment bap and HDG11

DIOPT Version :9

Sequence 1:	NP_732637.1	Gene:	bap / 42537	FlyBaseID:	FBgn0004862	Length:	382	Species:	Drosophila melanogaster
Sequence 2:	NP_177479.1	Gene:	HDG11 / 843671	AraportID:	AT1G73360	Length:	722	Species:	Arabidopsis thaliana

Alignment Length:	213	Identity:	52/213 - (24%)
Similarity:	85/213 - (39%)	Gaps:	37/213 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly   167 HDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTK 231
            ||||...|||:.....:..|:..||..|.:..:....:|:::::.|.|...|:|.||||||.:.|
plant    24 HDGSETDRKKKRYHRHTAQQIQRLESSFKECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLK 88

  Fly   232 RKQIQQHEAALLGASKRVPVQ-VLVREDGSTTYAHMAAPGAGH---GLDP-------ALINIY-R 284
            .:..:...:||...:.::..: :.:||    ...|...|..|.   ..||       .:.|.: |
plant    89 AQHERADNSALKAENDKIRCENIAIRE----ALKHAICPNCGGPPVSEDPYFDEQKLRIENAHLR 149

  Fly   285 HQLQ------LAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSPVPIP---I 340
            .:|:      ..|.|.|:.|:..    .:|.|     |.|...|.:.:|..........:.   :
plant   150 EELERMSTIASKYMGRPISQLST----LHPMH-----ISPLDLSMTSLTGCGPFGHGPSLDFDLL 205

  Fly   341 PG---AVRPQRTPCPSPN 355
            ||   ||.|.......||
plant   206 PGSSMAVGPNNNLQSQPN 223

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	15/52 (29%)
HDG11	NP_177479.1	Homeobox	35..88	CDD:278475	15/52 (29%)
		START_ArGLABRA2_like	231..456	CDD:176884
		SRPBCC	517..>562	CDD:301327
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000