DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and HAT14

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_196289.2 Gene:HAT14 / 830560 AraportID:AT5G06710 Length:336 Species:Arabidopsis thaliana


Alignment Length:221 Identity:64/221 - (28%)
Similarity:94/221 - (42%) Gaps:48/221 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RMSSVDSEP--EPEKLKPS-----SDRER-SISKSPPLCCRDLGLY---KLTQPKEIQPSARQPS 92
            |..|..|.|  |.||.||:     ||..| |.|..|||   .|.|:   .|.:..:.:...|.|.
plant    53 RSLSSSSSPSVEDEKKKPAPRAKKSDEFRVSSSVDPPL---QLQLHFPNWLPENSKGRQGGRMPL 114

  Fly    93 NYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDM--------RRCTSNDSD 149
            .    .|..::......:|..:.:.|..|.:         |.:..||.        ||  ||..|
plant   115 G----AATVVEEEEEEEEAVPSMSVSPPDSV---------TSSFQLDFGIKSYGYERR--SNKRD 164

  Fly   150 CDSPPPLSSSPSESPLSHDGSGLSRKK----RSRAAFSHAQVFELERRFAQQRYLSGPERSEMAK 210
            .|.....|:|.:.:..:.|.:|.:|||    :.::||       ||..|.:...|:..::..:||
plant   165 IDDEVERSASRASNEDNDDENGSTRKKLRLSKDQSAF-------LEDSFKEHSTLNPKQKIALAK 222

  Fly   211 SLRLTETQVKIWFQNRRYKTKRKQIQ 236
            .|.|...||::||||||.:||.||.:
plant   223 QLNLRPRQVEVWFQNRRARTKLKQTE 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 18/52 (35%)
HAT14NP_196289.2 HOX 187..243 CDD:197696 21/62 (34%)
HALZ 245..288 CDD:128634 2/4 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.