DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and Zfhx4

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001355600.1 Gene:Zfhx4 / 80892 MGIID:2137668 Length:3607 Species:Mus musculus


Alignment Length:475 Identity:96/475 - (20%)
Similarity:153/475 - (32%) Gaps:159/475 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NMESAGVSAAMAGLSKSLT---TPFSINDILTRSNPETRRMSSVDSEP-----------EPEKLK 53
            ::|:....:|.||..:|.|   ...|||..:  |:..|....:.|.|.           .|::.|
Mouse  2774 DVENLNAPSADAGYDQSKTDFDETSSINTAI--SDATTGDEGAADMENTGGSGEVKPALSPKETK 2836

  Fly    54 PSSDRERSISKSPPLCCRDLGLYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSS 118
            .....::..:......|.|..|:.||.| .|..:.:...:...:|.....::|            
Mouse  2837 TLDSLQKPATTPTTEVCDDKFLFSLTSP-SIHFNDKDGDHDQSFYITDDPDDN------------ 2888

  Fly   119 AADYMQRKLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFS 183
             ||                   |..||:.:|..||.|..||......|:|..|   .||.|...|
Mouse  2889 -AD-------------------RSETSSIADPSSPNPFGSSNPFKSKSNDRPG---HKRFRTQMS 2930

  Fly   184 HAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQ------------ 236
            :.|:..|:..|:..|..:..|...:...:.|.:..|::||||.|.|.|:.:|.            
Mouse  2931 NLQLKVLKACFSDYRTPTMQECEMLGNEIGLPKRVVQVWFQNARAKEKKFKINIGKPFMINQSGT 2995

  Fly   237 ---QHEAALLGA--SKRVPVQ-------------------------------------------- 252
               :.|..|.|.  |.|:.::                                            
Mouse  2996 DGTKPECTLCGVKYSARLSIRDHIFSKQHISKVRETVGSQLDREKDYLAPTTVRQLMAQQELDRI 3060

  Fly   253 --------VLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLP-LPQMQMPFPYFYP 308
                    :.|::.|.|....:      ||:          .||.||.||| ||      |...|
Mouse  3061 KKASDVLGLTVQQQGITDNCSL------HGI----------SLQAAYPGLPGLP------PVILP 3103

  Fly   309 QHKVPQPIPPPTQSSSFVTA---------SSASSSPVPIPIPGAVR------PQRTPCPSPNGQM 358
            ....|..:|...|:|:.:|:         |||:|||......|..:      |...|.|.|...:
Mouse  3104 GMNGPSSLPGFPQNSNTLTSPGTGMLGFPSSATSSPALSLSSGPTKSLLQTPPPPPPPPPPPSSL 3168

  Fly   359 MSVESGAESVHSAAEDVDEN 378
            ...::..::..|..:....|
Mouse  3169 SGQQTEPQNKESEKKQTKPN 3188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 15/52 (29%)
Zfhx4NP_001355600.1 C2H2 Zn finger 613..634 CDD:275368
C2H2 Zn finger 644..665 CDD:275368
C2H2 Zn finger 699..716 CDD:275368
C2H2 Zn finger 1396..1416 CDD:275371
C2H2 Zn finger 1424..1441 CDD:275371
SFP1 <1468..1608 CDD:227516
C2H2 Zn finger 1540..1564 CDD:275368
C2H2 Zn finger 1592..1610 CDD:275368
COG5576 2098..2237 CDD:227863
HOX 2127..2182 CDD:197696
Homeobox 2226..2280 CDD:395001
COG5576 2536..>2658 CDD:227863
Homeobox 2603..2656 CDD:395001
Homeobox 2926..2979 CDD:395001 15/52 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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