DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hmx1

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001106998.1 Gene:hmx1 / 797503 ZFINID:ZDB-GENE-080204-54 Length:282 Species:Danio rerio


Alignment Length:148 Identity:55/148 - (37%)
Similarity:72/148 - (48%) Gaps:29/148 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 TLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSGL------------------------- 172
            |..:|.:..|.:|..|..|...||:|.|.:..:....||.                         
Zfish    83 TSRSPREESRNSSEYSRSDRDTPLASEPLDGVVDRKMSGCAVDEGDDARQLFDERSGPDTSEPGS 147

  Fly   173 SRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQ 237
            :|||::|..||.:|||:||..|..:||||..||:.:|.||.||||||||||||||.|.||:....
Zfish   148 ARKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAD 212

  Fly   238 HEAALLGASK----RVPV 251
            .||.....:.    |||:
Zfish   213 LEAVNFNHNSQRIVRVPI 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 34/55 (62%)
hmx1NP_001106998.1 Homeodomain 151..207 CDD:459649 34/55 (62%)

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