DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hmx3

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001072829.1 Gene:hmx3 / 780290 XenbaseID:XB-GENE-483776 Length:306 Species:Xenopus tropicalis


Alignment Length:350 Identity:102/350 - (29%)
Similarity:142/350 - (40%) Gaps:118/350 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TPFSINDILTRSNPETRRMSSVDSEP----EPEK-----LKPSSDRERSISKSPPLCCRDLGLYK 77
            :||||..:||             .||    .|.|     :|.:.| ..:.:.||        |..
 Frog    16 SPFSIKSLLT-------------CEPSRAVRPHKALFTPIKGALD-GAAFALSP--------LTD 58

  Fly    78 LTQPKEIQPSAR--QPSNYLQ-----YYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLA 135
            ||.|:...|:.|  .|::||:     :|:..:.:..|      |..:...|    |....|.|  
 Frog    59 LTFPRLEIPAQRFALPAHYLERSPAWWYSYTLAHGGH------TPRTEVPD----KSLLLGPT-- 111

  Fly   136 APLDMRRCTSNDSDCDSPPPL-------------SSSPSESPLSH--------DGSGLS------ 173
            :|:       :..:.|||.|:             |.||.|..|..        |.||..      
 Frog   112 SPV-------SGGERDSPEPIHPLKAELEAKDSESKSPEEIILEESEPEEGKKDDSGEDWKKREE 169

  Fly   174 -------RKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTK 231
                   |||::|..||.:|||:||..|..:||||..||:.:|.||.||||||||||||||.|.|
 Frog   170 SPDKKPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWK 234

  Fly   232 RKQIQQHEAALL---GASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGG 293
            |:...:.|||.|   .|.:.|.|.:|..|:.|:  |..|:..|                     .
 Frog   235 RQLAAELEAANLSHAAAQRIVRVPILYHENSSS--AESASSAA---------------------N 276

  Fly   294 LPLPQMQMPFPY-FYPQHKVPQPIP 317
            :|:.|..:.||: .|..|.|...:|
 Frog   277 VPVSQPLLTFPHPVYYSHPVVTSVP 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 33/52 (63%)
hmx3NP_001072829.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..181 22/104 (21%)
Homeobox 181..235 CDD:365835 33/53 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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