DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and vox

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571773.1 Gene:vox / 64807 ZFINID:ZDB-GENE-010108-1 Length:242 Species:Danio rerio


Alignment Length:249 Identity:66/249 - (26%)
Similarity:93/249 - (37%) Gaps:67/249 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 PKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTS 145
            |..:||  |.|::|.:.|.......|.....|.:|..:.|....|                    
Zfish    34 PCVVQP--RPPTSYDKVYLQPKPKINKAELKTESSKETPAQVTPR-------------------- 76

  Fly   146 NDSDCDSPPPLSSS------PSESPLS--------HDGSGLSRKKRSRAAFSHAQVFELERRFAQ 196
               :|.||....:|      .||:..|        ||.......:|.|..|:..|:.:||:.|.:
Zfish    77 ---NCSSPSFSENSGYSSGYESEAAASECASVEDGHDAEKDGATRRIRTKFTPEQIDKLEKIFNK 138

  Fly   197 QRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVREDGST 261
            .:||...||.:.|..|.|:|||::.||||||.|.|| ::|:..|..|.....:|..:.|:..   
Zfish   139 HKYLDAGERVKTALKLGLSETQIRTWFQNRRMKLKR-EVQEMRADFLLPQMVLPPVIPVQYQ--- 199

  Fly   262 TYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPL-PQMQMPFPYFYPQHKVPQ 314
            .|.....|...||                    || .||.||   .:|.|..||
Zfish   200 CYDRQRLPFPPHG--------------------PLVQQMMMP---LHPHHPHPQ 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 23/52 (44%)
voxNP_571773.1 COG5576 75..>187 CDD:227863 39/135 (29%)
Homeobox 121..173 CDD:278475 23/51 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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