Protein Alignment bap and Vax2

DIOPT Version :10

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_072159.2
• Gene: Vax2 / 64572
• RGDID: 621133
• Length: 292
• Species: Rattus norvegicus
• Alignment Length: 251
• Identity: 69/251 - (27%)
• Similarity: 108/251 - (43%)
• Gaps: 50/251 - (19%)

  Fly   109 HQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSP-SESPLSHDGSG- 171
            |:......:.......|::|  |::.::|...|   .:..|.|....|..:. ....|..|..|
  Rat    28 HRGAEDLRADTGSTSPREIA--GTSASSPAGSR---ESGGDSDGQQALGETDHCRRILVRDAKGT 87

  Fly   172 -----------LSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQN 225
                       |.|.||:|.:|:..|::.||..|.:.:|:.|.||:|:|:.|.|:|||||:||||
  Rat    88 IREIVLPKGLDLDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQN 152

  Fly   226 RRYKTKRKQIQQHE-AALLGASKRVPVQVLVR--EDGSTTYAHMAAPGAGH--GLDPALINIYRH 285
            ||.|.|:.|.:..| .|...||:......::|  |.|..    ::.|.|..  .|.|.|..
  Rat   153 RRTKQKKDQSRDLEKRASSSASEAFATSNVLRLLEQGRL----LSVPRAPSLLALSPGLPG---- 209

  Fly   286 QLQLAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSPVPIPIP 341
             |...:.|..|..         |::...:..|.|         |:::|||:|.|:|
  Rat   210 -LTAGHRGTSLGD---------PRNSSQRLNPMP---------SASASSPLPPPLP 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeodomain	176..232	CDD:459649	28/55 (51%)
Vax2	NP_072159.2	vax upstream domain	74..101		4/26 (15%)
		homeobox	102..161		29/58 (50%)
		Homeodomain	103..159	CDD:459649	28/55 (51%)
		vax downstream domain	182..193		3/14 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..241		8/46 (17%)
		vax terminal domain	266..274