DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hmx3a

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571709.2 Gene:hmx3a / 60310 ZFINID:ZDB-GENE-001020-1 Length:297 Species:Danio rerio


Alignment Length:337 Identity:92/337 - (27%)
Similarity:133/337 - (39%) Gaps:100/337 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDL----GLYKLTQPKEIQ-PSARQPSNY 94
            |||.:.:...::..|..:|...:.:...||..|:.....    |.:.|:|..||. |....|   
Zfish     2 PETTQDTCASAKDSPFFIKNLLNSDSKPSKPKPILAPTKAGLDGSFSLSQVGEINFPRFELP--- 63

  Fly    95 LQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLA-YFGSTLAAPLDMRRC----TSNDS------ 148
                               |...:...|::|..| ::..||:|...:.|.    .:.||      
Zfish    64 -------------------TQRFALPAYLERASAWWYPYTLSASAHLHRTEAAQKARDSSPTTGT 109

  Fly   149 DCDSPP-PLSSSPS----------------ESPLSHDG---SGLS--------------RKKRSR 179
            |.|||. .|.|.|.                |...:.||   .|:.              |||::|
Zfish   110 DRDSPELVLKSDPDAKDDEDDNKSGDEIVLEESDTEDGKKEGGIDDWKKSDDGADKKPCRKKKTR 174

  Fly   180 AAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALL- 243
            ..||.:|||:||..|..:||||..||:.:|.||.||||||||||||||.|.||:...:.|||.| 
Zfish   175 TVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLAAELEAANLS 239

  Fly   244 --GASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPY- 305
              .|.:.|.|.:|..|:.::...:.|                        |.:|:.|..:.||: 
Zfish   240 HAAAQRIVRVPILYHENSASESTNTA------------------------GNVPVSQPLLTFPHP 280

  Fly   306 FYPQHKVPQPIP 317
            .|..|.:...:|
Zfish   281 VYYSHPIVTSVP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 33/52 (63%)
hmx3aNP_571709.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..43 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..172 15/75 (20%)
Homeobox 173..226 CDD:278475 33/52 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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