DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hmx3a

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571709.3 Gene:hmx3a / 60310 ZFINID:ZDB-GENE-001020-1 Length:297 Species:Danio rerio


Alignment Length:346 Identity:96/346 - (27%)
Similarity:135/346 - (39%) Gaps:118/346 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQPKEIQ- 85
            :||.|.::|             :|:.:|.|.||        ..:|.....| |.:.|:|..||. 
Zfish    15 SPFFIKNLL-------------NSDSKPSKPKP--------ILAPTKAGLD-GSFSLSQVGEINF 57

  Fly    86 PSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLA-YFGSTLAAPLDMRRC----TS 145
            |....|                      |...:...|::|..| ::..||:|...:.|.    .:
Zfish    58 PRFELP----------------------TQRFALPAYLERASAWWYPYTLSASAHLHRTEAAQKA 100

  Fly   146 NDS------DCDSPP-PLSSSP-----------------SESPL--------------SHDGSGL 172
            .||      |.|||. .|.|.|                 .||..              |.||:..
Zfish   101 RDSSPTTGTDRDSPELVLKSDPDAKDDEDDNKSGDEIVLEESDTEDGKKEGSIDDWKKSDDGADK 165

  Fly   173 S--RKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQI 235
            .  |||::|..||.:|||:||..|..:||||..||:.:|.||.||||||||||||||.|.||:..
Zfish   166 KPCRKKKTRTVFSRSQVFQLESTFDMKRYLSSSERAGLAASLHLTETQVKIWFQNRRNKWKRQLA 230

  Fly   236 QQHEAALL---GASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLP 297
            .:.|||.|   .|.:.|.|.:|..|:.::...:.|                        |.:|:.
Zfish   231 AELEAANLSHAAAQRIVRVPILYHENSASESTNTA------------------------GNVPVS 271

  Fly   298 QMQMPFPY-FYPQHKVPQPIP 317
            |..:.||: .|..|.:...:|
Zfish   272 QPLLTFPHPVYYSHPIVTSVP 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 34/55 (62%)
hmx3aNP_571709.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 24..43 6/26 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..172 16/75 (21%)

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