DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hoxa1a

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571611.1 Gene:hoxa1a / 58051 ZFINID:ZDB-GENE-000823-5 Length:329 Species:Danio rerio


Alignment Length:233 Identity:66/233 - (28%)
Similarity:91/233 - (39%) Gaps:45/233 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 CRDLGLYKLTQPKEIQPSARQ--PSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGS 132
            |.....|.|.|..|...|..|  |..|....::.:..:.||.....:.|.......|...|.:|:
Zfish    95 CTGYNHYALNQDVESSVSFPQCGPLVYSGNISSTVVQHRHHRHGYSSGNVHLHGQFQYGSATYGN 159

  Fly   133 -------TLAA----PLDMRRCTSNDSDCDSPPPLS----------------SSPSESPLSHDGS 170
                   |..|    ||.......:|:.|.   |||                :.|........|.
Zfish   160 SSDQANLTFVAGCSNPLSPLHVPHHDACCS---PLSDGVPTGQTFDWMKVKRNPPKTGKAGEYGF 221

  Fly   171 GLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQI 235
            | .:....|..||..|:.|||:.|...:||:...|.|:|.||:|.||||||||||||.|.|::: 
Zfish   222 G-GQPNTVRTNFSTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKRE- 284

  Fly   236 QQHEAALLGASKRVPVQVLVREDG--STTYAHMAAPGA 271
               :..||      |..:..::||  .|..|...:|.|
Zfish   285 ---KEGLL------PKSLSEQKDGLEKTEDASEKSPSA 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 29/52 (56%)
hoxa1aNP_571611.1 Antp-type hexapeptide 200..205 0/4 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..227 3/19 (16%)
Homeobox 229..281 CDD:278475 29/51 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 277..329 12/47 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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