DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and alx3

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_005167168.1 Gene:alx3 / 566955 ZFINID:ZDB-GENE-120221-3 Length:364 Species:Danio rerio


Alignment Length:332 Identity:84/332 - (25%)
Similarity:123/332 - (37%) Gaps:99/332 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCC-----------RDLGLYKLTQPKE 83
            |:.|:|..|  .:.|:.|..|....|..:...:.|||.|..           .|.|....|....
Zfish     7 LSFSSPPNR--ITPDNSPGLEHNSSSFFQCDDLQKSPHLALAHRHEFFMGRYADGGSADFTHGVS 69

  Fly    84 IQPSARQPSNYLQYYAAAMDNNNHHHQATGT--------SNSSAADYMQRKLAYFGSTLAAP--- 137
            .......|..:.:|    ::|.|...:.:.|        :||.|.|          .||:.|   
Zfish    70 STTPRASPGKHTKY----LENINQDQKPSITEKNSSFYETNSDAGD----------KTLSKPLGY 120

  Fly   138 --LDMRRC-----TSN----DSDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELE 191
              ||...|     .||    ||..|              |.|.||.::|:|:|..||..|:.|||
Zfish   121 PALDSECCGKLKEASNGLTGDSIAD--------------SIDLSGKNKKRRNRTTFSTFQLEELE 171

  Fly   192 RRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRK-------QIQQHEAALLGASKRV 249
            :.|.:..|.....|.::|....|||.:|::||||||.|.:::       :::.|.||      ..
Zfish   172 KVFQKTHYPDVYAREQLALRTELTEARVQVWFQNRRAKWRKRERYGKMQEVRNHFAA------TY 230

  Fly   250 PVQVLVREDGSTTY--------AHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYF 306
            .:.:|.|.|   ||        :...|.||| |...|.:        |....:|...|.   ||.
Zfish   231 DISLLPRSD---TYQMQNSLWPSGAGATGAG-GASSACV--------LGTENMPSSCMS---PYP 280

  Fly   307 YPQHKVP 313
            :|...:|
Zfish   281 HPHGNLP 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 22/52 (42%)
alx3XP_005167168.1 Homeobox 159..211 CDD:278475 22/51 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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