DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and pb

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:XP_061500970.1 Gene:pb / 5667717 VectorBaseID:AGAMI1_011971 Length:790 Species:Anopheles gambiae


Alignment Length:217 Identity:59/217 - (27%)
Similarity:84/217 - (38%) Gaps:60/217 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 SGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQ 234
            :||.|  |.|.|:::.|:.|||:.|...:||..|.|.|:|.||.|||.|||:||||||.|.||  
Mosquito   181 NGLPR--RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR-- 241

  Fly   235 IQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQM 299
                             |.|.:.|...:           |.|....:..:...|    |..||. 
Mosquito   242 -----------------QTLSKTDDDES-----------GKDDLKDSNSKKSCQ----GCELPS- 273

  Fly   300 QMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSPVPIPIPGAVRPQRTP-----CPSPNGQMM 359
                          ..||..|.||..:.    :::|..:..|.:.....||     ..|.....:
Mosquito   274 --------------DDIPDSTSSSRGMN----NNTPNTVMTPNSTIDISTPTGGGGSTSGGTNAV 320

  Fly   360 SVESGAESVHSAAEDVDENVEI 381
            |.:|...|..|..|:.|.:.::
Mosquito   321 SADSSVASTDSIDEEDDVHAKV 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 29/55 (53%)
pbXP_061500970.1 None

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