DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and barhl1b

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001018142.1 Gene:barhl1b / 553186 ZFINID:ZDB-GENE-060118-2 Length:323 Species:Danio rerio


Alignment Length:386 Identity:97/386 - (25%)
Similarity:131/386 - (33%) Gaps:133/386 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FSINDILTR--SNPETRRMSSVDSE-PEPEKLKPSSDRERSISKSPPL----CCRDLGL---YKL 78
            |.|:.:|:.  .:|...:..|:..| ..|.:..|.||.|...| |||.    |..|...   :.|
Zfish    10 FGIDSLLSHRPGSPVISKGDSLVGECRSPLEFSPRSDLESGCS-SPPSPRRECVEDAAQRQGHPL 73

  Fly    79 TQPKEIQ----PSARQPSNYLQYY--------------AAAMDNNNHHHQATGTSNSSAADYMQR 125
            .....:|    .:..||......:              .|...:|....|..|...|..||.:..
Zfish    74 AYASHLQHGPISAGSQPRTVASSFLIRDILADCKPLAACAPYSSNGQPTQEAGRLASKIADDLIE 138

  Fly   126 KLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGS------------GLSRKKRS 178
            |:                .||          |||.||..:..:|.            .|.:.:::
Zfish   139 KI----------------HSN----------SSSDSEYKVKEEGDREISSSRDSPQVRLKKPRKA 177

  Fly   179 RAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALL 243
            |.||:..|:.:|||.|.:|:|||..:|.|:|.||.||:||||.|:||||.|.||:.....|    
Zfish   178 RTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLE---- 238

  Fly   244 GASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYP 308
                      |:.|.|:                              |..|   |...|.|||||
Zfish   239 ----------LLAEAGN------------------------------YSAL---QRMFPSPYFYP 260

  Fly   309 QHKVPQ-------------PIPPPTQSSSFVT------ASSASSSPVPIPIPGAVRPQRTP 350
            |..|..             ..|||......|.      ...||..|.|:|....|.|:.||
Zfish   261 QSLVSNLDPGAALYLYRGPSAPPPALQRPLVPRILLHGLQGASEPPPPLPPLSGVLPRPTP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 29/55 (53%)
barhl1bNP_001018142.1 Homeodomain 175..231 CDD:459649 29/55 (53%)

Return to query results.
Submit another query.