DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and barhl1b

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001018142.1 Gene:barhl1b / 553186 ZFINID:ZDB-GENE-060118-2 Length:323 Species:Danio rerio


Alignment Length:386 Identity:97/386 - (25%)
Similarity:131/386 - (33%) Gaps:133/386 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FSINDILTR--SNPETRRMSSVDSE-PEPEKLKPSSDRERSISKSPPL----CCRDLGL---YKL 78
            |.|:.:|:.  .:|...:..|:..| ..|.:..|.||.|...| |||.    |..|...   :.|
Zfish    10 FGIDSLLSHRPGSPVISKGDSLVGECRSPLEFSPRSDLESGCS-SPPSPRRECVEDAAQRQGHPL 73

  Fly    79 TQPKEIQ----PSARQPSNYLQYY--------------AAAMDNNNHHHQATGTSNSSAADYMQR 125
            .....:|    .:..||......:              .|...:|....|..|...|..||.:..
Zfish    74 AYASHLQHGPISAGSQPRTVASSFLIRDILADCKPLAACAPYSSNGQPTQEAGRLASKIADDLIE 138

  Fly   126 KLAYFGSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGS------------GLSRKKRS 178
            |:                .||          |||.||..:..:|.            .|.:.:::
Zfish   139 KI----------------HSN----------SSSDSEYKVKEEGDREISSSRDSPQVRLKKPRKA 177

  Fly   179 RAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALL 243
            |.||:..|:.:|||.|.:|:|||..:|.|:|.||.||:||||.|:||||.|.||:.....|    
Zfish   178 RTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRRTKWKRQTAVGLE---- 238

  Fly   244 GASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYP 308
                      |:.|.|:                              |..|   |...|.|||||
Zfish   239 ----------LLAEAGN------------------------------YSAL---QRMFPSPYFYP 260

  Fly   309 QHKVPQ-------------PIPPPTQSSSFVT------ASSASSSPVPIPIPGAVRPQRTP 350
            |..|..             ..|||......|.      ...||..|.|:|....|.|:.||
Zfish   261 QSLVSNLDPGAALYLYRGPSAPPPALQRPLVPRILLHGLQGASEPPPPLPPLSGVLPRPTP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 29/52 (56%)
barhl1bNP_001018142.1 Oxidoreductase_nitrogenase 48..>88 CDD:295466 9/40 (23%)
Homeobox 178..230 CDD:278475 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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