DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment bap and lhx9

DIOPT Version :9

Sequence 1:	NP_732637.1	Gene:	bap / 42537	FlyBaseID:	FBgn0004862	Length:	382	Species:	Drosophila melanogaster
Sequence 2:	NP_001032320.2	Gene:	lhx9 / 550405	ZFINID:	ZDB-GENE-050417-210	Length:	396	Species:	Danio rerio

Alignment Length:	227	Identity:	44/227 - (19%)
Similarity:	73/227 - (32%)	Gaps:	90/227 - (39%)

- Green bases have known domain annotations that are detailed below.

  Fly   143 CTSNDSD----CDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGP 203
            |..||:|    ...|.|    ||:           :.||.|.:|.|.|:..::..||........
Zfish   246 CNENDADHLDRDQQPYP----PSQ-----------KTKRMRTSFKHHQLRTMKSYFAINHNPDAK 295

  Fly   204 ERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAA 268
            :..::|:...||:..:::||||.|.|.:|..::|...   |..|         .||::
Zfish   296 DLKQLAQKTGLTKRVLQVWFQNARAKFRRNVLRQENG---GVDK---------ADGTS------- 341

  Fly   269 PGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASS 333
                                                           :|||:..|..:|..|.::
Zfish   342 -----------------------------------------------LPPPSSDSGALTPPSTAT 359

  Fly   334 SPVPIPIPGAVRPQRTPCPSPNGQMMSVESGA 365
            :     :.....|..|...|....:.|.|||:
Zfish   360 T-----LTDLTNPSITVVTSVTSSLDSHESGS 386

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	15/52 (29%)
lhx9	NP_001032320.2	LIM1_Lhx2	61..124	CDD:188853
		LIM2_Lhx2_Lhx9	129..187	CDD:188763
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	248..272		9/38 (24%)
		Homeobox	271..323	CDD:278475	15/51 (29%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	328..365		11/107 (10%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	377..396		4/10 (40%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910