DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and HGTX

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001368954.1 Gene:HGTX / 53446 FlyBaseID:FBgn0040318 Length:587 Species:Drosophila melanogaster


Alignment Length:258 Identity:78/258 - (30%)
Similarity:117/258 - (45%) Gaps:54/258 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GVSAAMAGLSKSLTTPFSINDIL---------TRSNPETRRMSSVDSEPEPEKLKPSSDRERSIS 63
            |.||:..|||.|    .|.|..|         :.|:..|...::....|.|..:      :..:|
  Fly   314 GSSASANGLSYS----HSPNSHLISDRGSGGSSSSSSTTTTNTNSQGAPNPHGI------DTILS 368

  Fly    64 KSPPLCCRDLGLYKLTQ---PK-EIQPSARQPSNYLQYYAAAMDNNNHHHQATGTS-NSSAADYM 123
            |.||:  ...||..||.   |: .|..:|...:.||.             |:.|.. .:.|...:
  Fly   369 KPPPV--TSAGLSALTGAGIPRFSIAAAAAGMAQYLS-------------QSQGAPLKTHAGHIV 418

  Fly   124 QRKLAYF---GSTLAAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHA 185
            .|...|:   ...:|.|:..|...||....:    ||.|....| |:|..|  :||.:|..||..
  Fly   419 DRTHLYWPGLQGLVANPIAWRERLSNTMSAN----LSQSHQHHP-SNDKDG--KKKHTRPTFSGQ 476

  Fly   186 QVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKR 248
            |:|.||:.|.|.:||:||||:::|.:|.::|:|||:||||||.|.:::     .||.:..:||
  Fly   477 QIFALEKTFEQTKYLAGPERAKLAYALGMSESQVKVWFQNRRTKWRKR-----HAAEMATAKR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 28/52 (54%)
HGTXNP_001368954.1 ROM1 179..>388 CDD:227709 22/85 (26%)
Homeobox 469..523 CDD:395001 28/53 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442244
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.950

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