DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and tin

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster


Alignment Length:327 Identity:85/327 - (25%)
Similarity:111/327 - (33%) Gaps:112/327 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TTPFSINDILTRSNPETRRMSS---VDSEPEPEKLKPSSD---------RERSISKSPPLCCRDL 73
            |||||:.|||...|.......|   :|.......|..:.:         .::......|:..:.|
  Fly    35 TTPFSVKDILNMVNQTEAYEGSYGHIDGAATASALFAAGEYQNPHQYLNHQQHQQSELPIPQQQL 99

  Fly    74 GLYKL----TQPKEIQPSARQPSNYL----QYYAAAMDNNNHHH--------QATGTSNSSAADY 122
            ....|    |....:.|....|.:.|    |.|........|||        .:....|.||:.:
  Fly   100 HHQHLDDGATTSSSLSPLLPPPPHQLYGGYQDYGMPAHMFQHHHGHPHQSFQHSASAYNMSASQF 164

  Fly   123 MQRKLA-------------------YFGSTLAA-------------------------------- 136
            .....|                   |.|:|.:|                                
  Fly   165 YAGASATAYQTPATYNYNYAGSGEVYGGATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQA 229

  Fly   137 --------PLDMR--RCTSNDSDCDS------------PPPLSSSPSE----------SPLSHDG 169
                    ||..|  ...||.|...|            ...::||.||          :|.|:.|
  Fly   230 PTQKLCVNPLSQRLMETASNSSSLRSIYGSDEGAKKKDNSQVTSSRSELRKNSISGNSNPGSNSG 294

  Fly   170 SGLSRKKRS-RAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRK 233
            |...|.||. |..||.|||.|||.||..::||:|.||..:|:.|.|:.|||||||||||||:||.
  Fly   295 STKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRG 359

  Fly   234 QI 235
            .|
  Fly   360 DI 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 32/53 (60%)
tinNP_524433.1 HOX 301..357 CDD:197696 34/55 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 1 0.900 - - E2759_KOG0842
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D858478at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24340
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.920

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