Protein Alignment bap and cdx1a

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_998001.2
• Gene: cdx1a / 405762
• ZFINID: ZDB-GENE-050510-1
• Length: 228
• Species: Danio rerio
• Alignment Length: 215
• Identity: 58/215 - (26%)
• Similarity: 89/215 - (41%)
• Gaps: 64/215 - (29%)

  Fly    72 DLGLY-------KLTQPK-EIQPSARQPSNYLQYYAAAMDNNNHHHQAT---------------- 112
            |..:|       .|:||. .:.|||..| :|..|:......|:.||..:
Zfish     8 DTAMYGNPARHLNLSQPHLNVYPSAPYP-DYSGYHPGPALGNDLHHTGSSWSPGFGPGSRDDWPP 71

  Fly   113 ----GTSNSSAADYMQRKL---AYFGSTLAAPLD-------MRRCTSNDSDCDSPPPLSSSPSES 163
                ||.:|..|:.::..:   ...|....||:|       |||              |:.|
Zfish    72 LYGHGTGHSLPANGVEVSVLPSVDQGLLSGAPVDREEPQDWMRR--------------SAVP--- 119

  Fly   164 PLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRY 228
              ::.|.....|.:.|..:|..|..|||:.|...||::...::|:|.:|.|:|.||||||||||.
Zfish   120 --TNPGGKTRTKDKYRVVYSDVQRLELEKEFHFSRYITIRRKAELAGTLNLSERQVKIWFQNRRA 182

  Fly   229 KTKR------KQIQQHEAAL 242
            |.::      :|:||..:.|
Zfish   183 KERKMNKKRLQQVQQSSSGL 202

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	25/52 (48%)
cdx1a	NP_998001.2	Caudal_act	11..115	CDD:282574	22/104 (21%)
		COG5576	<122..227	CDD:227863	31/81 (38%)
		Homeobox	133..185	CDD:278475	25/51 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910