Protein Alignment bap and Nkx2-4

DIOPT Version :10

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_038962557.1
• Gene: Nkx2-4 / 366213
• RGDID: 1304985
• Length: 353
• Species: Rattus norvegicus
• Alignment Length: 408
• Identity: 102/408 - (25%)
• Similarity: 139/408 - (34%)
• Gaps: 142/408 - (34%)

  Fly    16 LSKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQ 80
            ||...|||||::|||:......::...|                  :..:||.....||......
  Rat     3 LSPKHTTPFSVSDILSPIEETYKKFGGV------------------MDGAPPGLGAPLGAAAYRA 49

  Fly    81 PKEIQPSAR-------QPSNYLQYY---------AAAMDNNNHHHQATGTS---NSSAADYMQRK 126
            | ...||::       ||.:.:..:         |||......:|...|.|   :|:...|....
  Rat    50 P-PTGPSSQAAAVAGMQPPHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQFPHSAMGSYCNGG 113

  Fly   127 LAYFGSTLAAPLDMR----RCTSNDSDCDSPPPLSS-------------------------SPSE 162
            |...|...|....||    ...:.....::.|..||                         :.|.
  Rat   114 LGNMGELPAYTDGMRGGAAAAATGWYGANTDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSL 178

  Fly   163 SPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRR 227
            :||.   :...|:|| |..||.|||:||||||.||:|||.|||..:|..:.||.|||||||||.|
  Rat   179 APLH---AAAPRRKR-RVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHR 239

  Fly   228 YKTKRKQIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYG 292
            ||.||:            :|....|.|.:|.               ||.|
  Rat   240 YKMKRQ------------AKDKAAQQLQQEG---------------GLGP--------------- 262

  Fly   293 GLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSP------VPIPIPGAVRPQRTPC 351
                                |.|.|||:.....|........|      .|.|..|..:||   .
  Rat   263 --------------------PPPPPPPSPRRVAVPVLVKDGKPCQNGAGTPTPGQGGQQPQ---A 304

  Fly   352 PSPNGQMMSVESGAESVH 369
            |:|..::..:.|...::|
  Rat   305 PTPASELEELSSSPPALH 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeodomain	176..232	CDD:459649	37/55 (67%)
Nkx2-4	XP_038962557.1	Homeodomain	188..244	CDD:459649	37/56 (66%)