Protein Alignment bap and Nkx2-4

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_038962557.1
• Gene: Nkx2-4 / 366213
• RGDID: 1304985
• Length: 353
• Species: Rattus norvegicus
• Alignment Length: 408
• Identity: 102/408 - (25%)
• Similarity: 139/408 - (34%)
• Gaps: 142/408 - (34%)

  Fly    16 LSKSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQ 80
            ||...|||||::|||:......::...|                  :..:||.....||......
  Rat     3 LSPKHTTPFSVSDILSPIEETYKKFGGV------------------MDGAPPGLGAPLGAAAYRA 49

  Fly    81 PKEIQPSAR-------QPSNYLQYY---------AAAMDNNNHHHQATGTS---NSSAADYMQRK 126
            | ...||::       ||.:.:..:         |||......:|...|.|   :|:...|....
  Rat    50 P-PTGPSSQAAAVAGMQPPHAMAGHNAAAAAAAAAAAAAAAATYHMPPGVSQFPHSAMGSYCNGG 113

  Fly   127 LAYFGSTLAAPLDMR----RCTSNDSDCDSPPPLSS-------------------------SPSE 162
            |...|...|....||    ...:.....::.|..||                         :.|.
  Rat   114 LGNMGELPAYTDGMRGGAAAAATGWYGANTDPRYSSISRFMGPSAGVNVAGMGSLTGIADAAKSL 178

  Fly   163 SPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRR 227
            :||.   :...|:|| |..||.|||:||||||.||:|||.|||..:|..:.||.|||||||||.|
  Rat   179 APLH---AAAPRRKR-RVLFSQAQVYELERRFKQQKYLSAPEREHLASMIHLTPTQVKIWFQNHR 239

  Fly   228 YKTKRKQIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYG 292
            ||.||:            :|....|.|.:|.               ||.|
  Rat   240 YKMKRQ------------AKDKAAQQLQQEG---------------GLGP--------------- 262

  Fly   293 GLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSFVTASSASSSP------VPIPIPGAVRPQRTPC 351
                                |.|.|||:.....|........|      .|.|..|..:||   .
  Rat   263 --------------------PPPPPPPSPRRVAVPVLVKDGKPCQNGAGTPTPGQGGQQPQ---A 304

  Fly   352 PSPNGQMMSVESGAESVH 369
            |:|..::..:.|...::|
  Rat   305 PTPASELEELSSSPPALH 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	35/52 (67%)
Nkx2-4	XP_038962557.1	Homeobox	190..244	CDD:395001	36/54 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910