DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and nkx2.3

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571498.1 Gene:nkx2.3 / 30698 ZFINID:ZDB-GENE-990415-178 Length:321 Species:Danio rerio


Alignment Length:377 Identity:109/377 - (28%)
Similarity:155/377 - (41%) Gaps:99/377 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 TTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPS-SDRERSISKSPPLCCRDLG---------- 74
            :||||:.||| :...:||::.|:.......:|.|. .||    .::|..|....|          
Zfish     9 STPFSVKDIL-KLEQQTRQLQSLHPASHHAQLHPELQDR----FQAPSSCFLGGGDSPGFSDNEE 68

  Fly    75 ----LYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQ-RKLAYFGSTL 134
                |..|:....:..|:..|..::             |.|.|..::...|.:: .:....|:.|
Zfish    69 KMSFLNSLSMQDSLVESSLSPPMFV-------------HPALGHVDTKLEDELEDHETKSCGAIL 120

  Fly   135 AAPLDMRRCTSNDSDCDSPPPLSSSPSESPLSHDGSGLSR---KKRSRAAFSHAQVFELERRFAQ 196
            ..|           :|           |:.:..|.....|   :::.|..||.||||||||||.|
Zfish   121 RTP-----------EC-----------EAEVHSDTERAQRQRTRRKPRVLFSQAQVFELERRFKQ 163

  Fly   197 QRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLG-----ASKRVPVQVLVR 256
            |||||.|||..:|.:|:||.|||||||||||||.|| |.|.....:.|     ..:||.|.||||
Zfish   164 QRYLSAPEREHLASTLKLTSTQVKIWFQNRRYKCKR-QRQDKTLEMAGHHHPPPPRRVAVPVLVR 227

  Fly   257 EDG----------STTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHK 311
             ||          :||||  ..||      |...|.|......||..        |:...||  .
Zfish   228 -DGKPCLTGSQSYNTTYA--VNPG------PYTYNGYSSYNNAAYTN--------PYSCTYP--S 273

  Fly   312 VPQPIPPPTQSSSFVTASSASSSPVPIPIPGAVRPQRTPCPSPNGQMMSVES 363
            :| |:|..|.:::.::.|..:......|    ...|.||..:..|.:..:.:
Zfish   274 LP-PLPANTSTNALMSMSLNNLGTYSQP----QTSQGTPVSACQGTLQGIRA 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 39/52 (75%)
nkx2.3NP_571498.1 HOX 142..198 CDD:197696 39/55 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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