DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and nkx2.5

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571496.2 Gene:nkx2.5 / 30696 ZFINID:ZDB-GENE-980526-321 Length:314 Species:Danio rerio


Alignment Length:346 Identity:107/346 - (30%)
Similarity:145/346 - (41%) Gaps:61/346 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 MAGLSKSLT-TPFSINDILT-RSNPETRRMSSVD-SEPEPEKLKPSSDRERSISKSPPLCCRDLG 74
            ||..|..:| ||||:.|||. ..|.|.  |.|:| |:.....|.|:|.            |. |.
Zfish     1 MAMFSSQMTSTPFSVRDILNLEQNQED--MVSLDMSQRLDSALIPTSS------------CM-LS 50

  Fly    75 LYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLD 139
            .:|..|..|:...:...|..||     .|..|    ...:.|.||:.:..:..........|..|
Zfish    51 TFKQEQFMEMPSGSSLFSEDLQ-----EDKGN----KINSINFSASGFYAKNFLEMDYVKDAKTD 106

  Fly   140 MRRCTSNDSD------CDSPP--PLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQ 196
               .|..|.:      |...|  .|....:|.|...      ::::.|..||.|||:||||||.|
Zfish   107 ---DTFEDKEKKDIGCCQEDPGEDLKLDDAERPKQR------KRRKPRVLFSQAQVYELERRFKQ 162

  Fly   197 QRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKR-KQIQQHEAALLGASKRVPVQVLVREDGS 260
            |:|||.|||..:|..|:||.|||||||||||||.|| :|.|..|...:...:|:.|.|||| ||.
Zfish   163 QKYLSAPERDHLANVLKLTSTQVKIWFQNRRYKCKRQRQDQTLEMVGIAPPRRISVPVLVR-DGK 226

  Fly   261 TTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHKVPQPIPPPTQSSSF 325
            ......:.....:.:.   ||.:.:....|:...|.|. ...:...||...  ..|.|...:|::
Zfish   227 PCLGDTSTYNTSYNVG---INHFTYNTYPAFSNFPSPG-NSNYSCNYPSSM--SSIQPSQSNSNY 285

  Fly   326 V---------TASSASSSPVP 337
            :         ..:|..||.||
Zfish   286 MNFGVGDLNNVQASFQSSSVP 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 37/52 (71%)
nkx2.5NP_571496.2 Homeobox 144..197 CDD:306543 37/52 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0842
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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