DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and emx2

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571355.2 Gene:emx2 / 30537 ZFINID:ZDB-GENE-990415-54 Length:247 Species:Danio rerio


Alignment Length:261 Identity:74/261 - (28%)
Similarity:99/261 - (37%) Gaps:99/261 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 TP---FSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQPKE 83
            ||   |:|..::.:.||                 .|||..|                      :.
Zfish     5 TPKRCFTIESLVAKDNP-----------------LPSSRSE----------------------EP 30

  Fly    84 IQPSARQPSNYLQYYAAAMDN---NNHHHQATGT-SN-----SSAADYMQRKLAYFGS-----TL 134
            |:|:|      |.|..::..|   |..|....|. ||     :.|..:.........|     .|
Zfish    31 IRPAA------LSYANSSQMNPFLNGFHSSGRGVYSNPGLVFAEAVSHPPNSAVPVHSVPPPHAL 89

  Fly   135 AA-PLDMRRCTSNDSDCDSPPPLSSSPSESP-------------LSHDGSG-------------L 172
            || ||         |...||.||.:|....|             |.|...|             |
Zfish    90 AAHPL---------SSSHSPHPLFASQQRDPSTFYPWLIHRYRYLGHRFQGNETSPESFLLHNAL 145

  Fly   173 SRK-KRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQ 236
            :|| ||.|.|||.:|:..||..|.:..|:.|.||.::|.||.|||||||:||||||.|.||::::
Zfish   146 ARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLE 210

  Fly   237 Q 237
            :
Zfish   211 E 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 29/52 (56%)
emx2NP_571355.2 Homeobox 153..205 CDD:278475 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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