DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and msx3

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571347.2 Gene:msx3 / 30526 ZFINID:ZDB-GENE-980526-306 Length:273 Species:Danio rerio


Alignment Length:357 Identity:92/357 - (25%)
Similarity:124/357 - (34%) Gaps:159/357 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AAMAGL-SKSLTTPFSINDILT-RSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDL 73
            ||:.|. .|:|:.|||:..::: |::..|...||     |...:.|:|..:..:..||       
Zfish    37 AAVKGCKGKALSLPFSVESLISDRTSSRTLYTSS-----EAGIISPTSGADERLKLSP------- 89

  Fly    74 GLYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPL 138
                                                         .|.|..||:         |:
Zfish    90 ---------------------------------------------MALYADRKI---------PV 100

  Fly   139 DMRRCTSNDSDC----------------------DSPPPLSSSPSESPLSHDGSGLSRKKRSRAA 181
            :   ..||.|||                      .|||..||.|..:...|     ...::.|..
Zfish   101 E---SVSNLSDCKRGDMEELSDKGQSGWFQTTSYTSPPRHSSPPPCTLRKH-----KNNRKPRTP 157

  Fly   182 FSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGAS 246
            |:.:|:..|||:|.|::|||..||:|.:.||.||||||||||||||.|.||.|    ||.|    
Zfish   158 FTTSQLLALERKFRQKQYLSIAERAEFSNSLNLTETQVKIWFQNRRAKAKRLQ----EAEL---- 214

  Fly   247 KRVPVQVLVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPYFYPQHK 311
                                                  .:|:||...| ||....|||  ...|.
Zfish   215 --------------------------------------EKLKLATKPL-LPAFAFPFP--LGTHV 238

  Fly   312 VPQPIPPPTQSSSFVTASSASSSPVP-IPIPG 342
            ...|:..|  ||||         |.| :|:||
Zfish   239 GSPPLYGP--SSSF---------PRPALPVPG 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 31/52 (60%)
msx3NP_571347.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..159 8/49 (16%)
Homeobox 154..207 CDD:278475 31/52 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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