Protein Alignment bap and hoxc3a

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: NP_001128157.2
• Gene: hoxc3a / 30421
• ZFINID: ZDB-GENE-980526-532
• Length: 263
• Species: Danio rerio
• Alignment Length: 240
• Identity: 65/240 - (27%)
• Similarity: 98/240 - (40%)
• Gaps: 52/240 - (21%)

  Fly     9 VSAAMAGLSKSLTTPFSI--NDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCR 71
            |..|:.| ...:||.|::  ..:.||.|..|.:..:.:|..|.:|....:.:..|..:.|
Zfish    28 VRKAIGG-GHHVTTLFTLVGKQLKTRENSSTWKRHAEESSSENDKGNVWNFQNLSNVQHP----- 86

  Fly    72 DLGLYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAA 136
                                      |:.:.|.|:....|.......|.:.....|    ||:..
Zfish    87 --------------------------YSFSDDGNHSLDPANALEREKACELSTSCL----STMKY 121

  Fly   137 PLDMRRCTSNDSDCDSPPPLSS-SPSESPLSHDGSG-----LSRKKRSRAAFSHAQVFELERRFA 195
            |. ||       :..:|...|| :..||..|...:|     .|..||:|.||:.:|:.|||:.|.
Zfish   122 PW-MR-------ETHAPTHFSSINAMESGDSKYSNGEAVVRNSSSKRARVAFTSSQLLELEKEFH 178

  Fly   196 QQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEA 240
            ...||....|.|||:.|:||:.|:||||||||.|.|:...::..|
Zfish   179 FSAYLCRNRRLEMAELLKLTDRQIKIWFQNRRMKYKKDHKEKSTA 223

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	27/52 (52%)
hoxc3a	NP_001128157.2	Abdominal-A	123..246	CDD:332641	41/109 (38%)
		Homeobox	162..214	CDD:306543	27/51 (53%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910