DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hoxa10b

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571230.2 Gene:hoxa10b / 30391 ZFINID:ZDB-GENE-990415-97 Length:347 Species:Danio rerio


Alignment Length:249 Identity:57/249 - (22%)
Similarity:87/249 - (34%) Gaps:76/249 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RMSSVDSEPEPEKLKPSSDRERSI-----SKSPPLCCRDLGLYKLTQPKEIQPSARQPSNYLQYY 98
            |:...:::..|....|:...|.|.     .|.|          |.|..::|..|...|:      
Zfish   103 RIEQPNNQITPRSFSPTIKEENSYCLYESEKCP----------KETITEDISYSRLTPN------ 151

  Fly    99 AAAMDNNNHHHQATG--------------TSNSSAADYM--QRKLAYFGSTLAAPLDMRRCTSND 147
            :....|||......|              |.|.:...::  ||...:..|..|...:..|     
Zfish   152 SCPSSNNNGCVPVPGYFRLSQTCTTSKGFTDNQTIPTHVVAQRSTRFDSSLSAIAAEASR----- 211

  Fly   148 SDCDSPPPL-------------------SSSPSESP-----LSHDGSGLSRK----------KRS 178
            .:.|.||..                   |..|.:||     ::..|...|..          ::.
Zfish   212 DESDEPPTCAPCAPGRNKELRGSTGTASSPEPPDSPEKAVTVTKAGDSKSESTANWLTAKSGRKK 276

  Fly   179 RAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKR 232
            |..::..|..|||:.|....||:...|.|:::|:.||:.||||||||||.|.|:
Zfish   277 RCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 24/52 (46%)
hoxa10bNP_571230.2 Homeobox 276..329 CDD:306543 24/52 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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