DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hoxa11b

DIOPT Version :10

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571222.1 Gene:hoxa11b / 30382 ZFINID:ZDB-GENE-990415-4 Length:283 Species:Danio rerio


Alignment Length:282 Identity:68/282 - (24%)
Similarity:108/282 - (38%) Gaps:78/282 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NMESAGVSAAMAGLSKSLTTPFSINDILTRSNPETRRMS---SVDSEPEPEKLKPSSDRERSISK 64
            ||...|.:..::|...|...||      ....|.:..|:   |..|.|:.:.::..|.|:.:|..
Zfish    13 NMYLPGCTYYVSGTDFSSLPPF------LPQTPSSCPMTYSYSTSSLPQVQSVREVSFRDYAIDT 71

  Fly    65 SP--------PLC----------CRDLGLYKLTQPKEIQPSARQPSNYLQYYAAAMDNNNHHHQA 111
            |.        |.|          |       |:.|..:.....: :|.:.|::    |::|....
Zfish    72 SSKWHSRGNLPHCYATEDMVHREC-------LSNPGTLGDMLSK-NNSVLYHS----NSSHTSNV 124

  Fly   112 TGT----------------------SNSSAADYMQRKLAYFGSTLAAP------LDMRRCTSNDS 148
            .|:                      .|......:.|      :|..||      .|..|.|....
Zfish   125 YGSVGRNGVLPQAFDQFFETAYGNVENQPTEHPVDR------ATSKAPPPAESGSDSCRGTDETE 183

  Fly   149 DCD---SPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAK 210
            .|:   ||.| ||..:|...|...:|...:|: |..::..|:.||||.|....|::..:|.::::
Zfish   184 RCEETSSPEP-SSGNNEDKFSGSSNGQKTRKK-RCPYTKYQIRELEREFFFSVYINKEKRLQLSR 246

  Fly   211 SLRLTETQVKIWFQNRRYKTKR 232
            .|.||:.||||||||||.|.|:
Zfish   247 MLNLTDRQVKIWFQNRRMKEKK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeodomain 176..232 CDD:459649 24/55 (44%)
hoxa11bNP_571222.1 DUF3528 26..151 CDD:432284 22/142 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 150..215 18/72 (25%)
Homeodomain 212..268 CDD:459649 24/56 (43%)

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