DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and hoxd9a

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_571201.3 Gene:hoxd9a / 30350 ZFINID:ZDB-GENE-990415-121 Length:262 Species:Danio rerio


Alignment Length:215 Identity:55/215 - (25%)
Similarity:79/215 - (36%) Gaps:57/215 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KSLTTPFSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQPK 82
            :|...|.:.:..||..:|.:|. |...:|..|.|...|:..|......|.        :.|....
Zfish    95 RSWIEPVANHISLTGFHPNSRH-SGTKTESLPPKRTESAAFETETPSVPE--------FSLNAVS 150

  Fly    83 EIQPSARQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTSND 147
            |....|.:                   :..|:.|||..:               |.|.::....|
Zfish   151 ESADKATE-------------------ERVGSDNSSHGE---------------PKDEKQQQQLD 181

  Fly   148 SDCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSL 212
                        ||....:...:..:|||  |..::..|..|||:.|....||:...|.|:|:.|
Zfish   182 ------------PSNPAANWIHARSTRKK--RCPYTKYQTLELEKEFLYNMYLTRDRRYEVARIL 232

  Fly   213 RLTETQVKIWFQNRRYKTKR 232
            .|||.||||||||||.|.|:
Zfish   233 NLTERQVKIWFQNRRMKMKK 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 26/52 (50%)
hoxd9aNP_571201.3 Hox9_act 1..182 CDD:282473 23/141 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 107..187 23/134 (17%)
Homeobox 198..251 CDD:278475 27/54 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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