DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment bap and hoxd4a

DIOPT Version :9

Sequence 1:	NP_732637.1	Gene:	bap / 42537	FlyBaseID:	FBgn0004862	Length:	382	Species:	Drosophila melanogaster
Sequence 2:	NP_001119917.1	Gene:	hoxd4a / 30329	ZFINID:	ZDB-GENE-980526-214	Length:	256	Species:	Danio rerio

Alignment Length:	214	Identity:	58/214 - (27%)
Similarity:	77/214 - (35%)	Gaps:	48/214 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    36 ETRRMSSVDSEPEPEKLKPSSDRE--------RSISKSPPLCCRDLGLYKLTQPKEIQPSARQPS 92
            |....:|...|..|....||.|.:        ||.....|..|           ..:|.|:.||.
Zfish    41 EEYSQNSYIPEQSPGYYSPSQDTDFQHPGIYSRSNYSEQPYSC-----------STVQGSSVQPR 94

  Fly    93 NYLQYYAAA---MDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAP------LDMRRCTSNDS 148
            .::|..|:.   .........|...|.|......|......|.....|      :.....|:.:.
Zfish    95 GHVQDQASTPSPFPAQTEQCPAVQISGSRTGGQQQNTKTQNGIPTKQPAVVYPWMKKVHVTTVNP 159

  Fly   149 DCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVFELERRFAQQRYLSGPERSEMAKSLR 213
            |...|.|                    ||||.|::..||.|||:.|...|||:...|.|:|.:|.
Zfish   160 DYTGPEP--------------------KRSRTAYTRQQVLELEKEFHFNRYLTRRRRIEIAHTLC 204

  Fly   214 LTETQVKIWFQNRRYKTKR 232
            |:|.|:||||||||.|.|:
Zfish   205 LSERQIKIWFQNRRMKWKK 223

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	28/52 (54%)
hoxd4a	NP_001119917.1	Homeobox	169..222	CDD:278475	28/52 (54%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910