Protein Alignment bap and Lhx2

DIOPT Version :9

• Sequence 1: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Sequence 2: XP_006234134.1
• Gene: Lhx2 / 296706
• RGDID: 71076
• Length: 414
• Species: Rattus norvegicus
• Alignment Length: 122
• Identity: 33/122 - (27%)
• Similarity: 53/122 - (43%)
• Gaps: 18/122 - (14%)

  Fly   124 QRKLAYFGSTLAAPLDMRRCTSNDS---DCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHA 185
            :||....|:.|||......|..||:   |.|.|.|.|               .:.||.|.:|.|.
  Rat   235 KRKSPGPGADLAAYNAALSCNENDAEHLDRDQPYPSS---------------QKTKRMRTSFKHH 284

  Fly   186 QVFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAAL 242
            |:..::..||........:..::|:...||:..:::||||.|.|.:|..::|....:
  Rat   285 QLRTMKSYFAINHNPDAKDLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENTGV 341

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	15/52 (29%)
Lhx2	XP_006234134.1	LIM1_Lhx2	43..106	CDD:188853
		LIM2_Lhx2_Lhx9	119..177	CDD:188763
		COG5576	<255..386	CDD:227863	26/102 (25%)
		Homeobox	278..331	CDD:395001	15/52 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910