DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment bap and Otp

DIOPT Version :9

Sequence 1:	NP_732637.1	Gene:	bap / 42537	FlyBaseID:	FBgn0004862	Length:	382	Species:	Drosophila melanogaster
Sequence 2:	NP_001093993.1	Gene:	Otp / 294640	RGDID:	727945	Length:	325	Species:	Rattus norvegicus

Alignment Length:	256	Identity:	67/256 - (26%)
Similarity:	106/256 - (41%)	Gaps:	42/256 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   131 GSTLAAPLDMRRCTSNDS-------DCDSPPPLSSSPSESPLSHDGSGLSRKKRSRAAFSHAQVF 188
            |:||....|:....|..:       |.|..|.....|:.|..... .|..::||.|..|:.||:.
  Rat    54 GATLLPGEDITTVGSTPASLAVSAKDPDKQPGPQGGPNPSQAGQQ-QGQQKQKRHRTRFTPAQLN 117

  Fly   189 ELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQV 253
            ||||.||:..|.....|.|:|..:.|||::|::||||||.|.|:::...:.....|        .
  Rat   118 ELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPG--------T 174

  Fly   254 LVREDGSTTYAHMAAPGAGHGLDPALINIYRHQLQLAYGGLP-LPQMQMPFPYFYPQHKVPQPI- 316
            |:...|...:...||..|. .:..:|.:.:.:..:.|...:| :.|:.:| |....|..:.|.:
  Rat   175 LLPTPGLPQFPSAAAAAAA-AMGDSLCSFHANDTRWAAAAMPGVSQLPLP-PALGRQQAMAQSLS 237

  Fly   317 -------PPPTQ---SSSFVTASSAS----------SSPVPIPIPGAVRPQRTP--CPSPN 355
                   |||..   |:|...::.|.          ...||..:||......:|  |.||:
  Rat   238 QCSLAAGPPPNSMGLSNSLAGSNGAGLQSHLYQPAFPGMVPASLPGPSNVSGSPQLCSSPD 298

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	25/52 (48%)
Otp	NP_001093993.1	Homeobox	107..156	CDD:395001	22/48 (46%)
Otp	NP_001093993.1	OAR	303..320	CDD:397759
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910