DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bap and Dlx3

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_001099302.1 Gene:Dlx3 / 287638 RGDID:1304875 Length:287 Species:Rattus norvegicus


Alignment Length:352 Identity:95/352 - (26%)
Similarity:134/352 - (38%) Gaps:117/352 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 RRMSSVDSEPEPEKLKPSSDRERSISKSPPL---CCRDLGLYKLTQPKEIQPSARQPSNYL-QYY 98
            |::||:.::     :..|.........||.|   ...|||.|          ||.|...|. |.|
  Rat     7 RKLSSILTD-----ISSSLSCHAGSKDSPTLPESSVTDLGYY----------SAPQHDYYSGQPY 56

  Fly    99 AAAMDNNNHHHQ-----ATGTSNSS-------AADYMQRKLAYFGSTLAAPLDMRRCTSNDSDCD 151
            ...::...:|||     ..||...|       ...|.|     :|:....||             
  Rat    57 GQTVNPYTYHHQFNLNGLAGTGAYSPKSEYTYGGSYRQ-----YGAYREQPL------------- 103

  Fly   152 SPPPLSSSPSESPLS---------HDGSGLSRK-KRSRAAFSHAQVFELERRFAQQRYLSGPERS 206
                    |::.|:|         ...:|..:| ::.|..:|..|:..|:|||.:.:||:.|||:
  Rat   104 --------PAQDPVSVKEEPEAEVRMVNGKPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERA 160

  Fly   207 EMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVREDGSTTYAHMAAPGA 271
            |:|..|.||:|||||||||||.|.|:          |..:..||::  ...:.|.:.|..:.|  
  Rat   161 ELAAQLGLTQTQVKIWFQNRRSKFKK----------LYKNGEVPLE--HSPNNSDSMACNSPP-- 211

  Fly   272 GHGLDPALINIYRHQLQLAYGGLPLPQMQMPFPY--------------FYPQ-----HKVPQPIP 317
                .|||.:...|... |....|||.   |.||              ::.|     |...|| |
  Rat   212 ----SPALWDTSSHSTP-APTRNPLPP---PLPYSASPNYLDDPTNSWYHTQNLSGPHLQQQP-P 267

  Fly   318 PPTQSSSFVTASSASSSPVPIPIPGAV 344
            .|        |:...:||.|.|.||||
  Rat   268 QP--------ATLHHASPGPPPNPGAV 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 29/52 (56%)
Dlx3NP_001099302.1 DLL_N 27..107 CDD:403572 25/115 (22%)
COG5576 <109..230 CDD:227863 44/139 (32%)
Homeobox 132..186 CDD:395001 29/53 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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