DRSC/TRiP Functional Genomics Resources

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Protein Alignment bap and tlx3b

DIOPT Version :9

Sequence 1:NP_732637.1 Gene:bap / 42537 FlyBaseID:FBgn0004862 Length:382 Species:Drosophila melanogaster
Sequence 2:NP_739572.1 Gene:tlx3b / 266965 ZFINID:ZDB-GENE-021021-1 Length:300 Species:Danio rerio


Alignment Length:262 Identity:69/262 - (26%)
Similarity:105/262 - (40%) Gaps:68/262 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 FSINDILTRSNPETRRMSSVDSEPEPEKLKPSSDRERSISKSPPLCCRDLGLYKLTQPKEIQPSA 88
            |.|:.||          |..|.|.:....:.||: ..|.|.|....|..||          .|:.
Zfish    26 FGIDQIL----------SGTDQESQQNSTRNSSE-SSSGSSSASGGCYHLG----------SPTG 69

  Fly    89 RQPSNYLQYYAAAMDNNNHHHQATGTSNSSAADYMQRKLAYFGSTLAAPLDMRRCTSNDSDCDSP 153
            ...:.|.              ..|||.:..||.|.:........|||....:|...........|
Zfish    70 ASATPYT--------------TLTGTFHGIAAPYEESSPYGVNLTLAPGGVIRVPAHRPLAAAVP 120

  Fly   154 PPLSSS-PSESPLS-------------------------------HDGSGLSRKKRSRAAFSHAQ 186
            ||::|: |....||                               :......::|:.|.:||..|
Zfish   121 PPMASAVPGLGSLSFPWMESSQRFAKDRFAAALTPFTVARRIGHPYQNRTPPKRKKPRTSFSRVQ 185

  Fly   187 VFELERRFAQQRYLSGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPV 251
            :.|||:||.:|:||:..||:.:||:|::|:.|||.||||||.|.:|:..::.||....|: |:.:
Zfish   186 ICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTWFQNRRTKWRRQTAEEREAERQQAN-RLMI 249

  Fly   252 QV 253
            |:
Zfish   250 QL 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bapNP_732637.1 Homeobox 178..231 CDD:278475 28/52 (54%)
tlx3bNP_739572.1 Homeobox 177..230 CDD:278475 28/52 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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