DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment bap and Prop1

DIOPT Version :9

Sequence 1:	NP_732637.1	Gene:	bap / 42537	FlyBaseID:	FBgn0004862	Length:	382	Species:	Drosophila melanogaster
Sequence 2:	NP_705891.1	Gene:	Prop1 / 266738	RGDID:	628759	Length:	223	Species:	Rattus norvegicus

Alignment Length:	199	Identity:	58/199 - (29%)
Similarity:	86/199 - (43%)	Gaps:	33/199 - (16%)

- Green bases have known domain annotations that are detailed below.

  Fly   156 LSSSPSESPLSH---DGSGLSR------------KKRSRAAFSHAQVFELERRFAQQRYLSGPER 205
            |.|:...||.:.   .|:||.|            ::|.|..|:.||:.:||..|.:.:|.....|
  Rat    32 LISTVDRSPETSKRLSGTGLGRPKLCPQRGRPHSRRRHRTTFNPAQLGQLESAFGRNQYPDIWVR 96

  Fly   206 SEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQV---LVREDGSTTYAHMA 267
            ..:|:...|:|.::::||||||.| :|||    |.:||..:..:....   .:.|.....|.:..
  Rat    97 EGLAQDTGLSEARIQVWFQNRRAK-QRKQ----ERSLLQPTAHLSPATFSGFLSESSPYPYTYTT 156

  Fly   268 APGAGHGLDPALINIYRHQL--QLAYG-GLPLP-QMQMPFPYFYPQH--KVPQPIPPPTQSSSFV 326
            .|..    .|...:.|.|.|  |...| .|.|| |.:..:|..:|.|  .:..|.|||..|.|..
  Rat   157 PPPP----VPCFPHPYNHALPSQPCTGASLTLPAQPEDWYPTLHPTHTGHLACPPPPPMFSLSLE 217

  Fly   327 TASS 330
            |..|
  Rat   218 TPKS 221

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
bap	NP_732637.1	Homeobox	178..231	CDD:278475	19/52 (37%)
Prop1	NP_705891.1	Homeobox	69..123	CDD:395001	19/54 (35%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910